Protein Information

Protein ZmCA5P16
ZmCA5P16 is a protein in the CCAAT-HAP5 family.
Information
TF Name:	ZmCA5P16
Species:	Maize
TF Family:	CCAAT-HAP5
Gene Name(Synonym):	CA5P16
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

Overview of domains present in v5 transcripts
	NF-YB	NF-YC	PF00125	PF00808
Zm00001eb316260_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d020874	DAPseq	sequence	fimo	position
Zm00001d020874	DAPseq	sequence	fimo	position
Zm00001d020874	ChIPseq	sequence	fimo	position
Zm00001d020874	PChIPseq	sequence	fimo	position

Zm00001eb316260_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MDPNKSSTPPPPPVMGAPVAYPPPAYPPGVAAGAGAYPPQLYAPPAAAAAQQAAAAQQQQLQIFWAEQYREIEATTDFKN
HNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPR
DDGKDADAAAAAAAAAAGIPRPAAGVPATDPLAYYYVPQQ

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00125
PF00808
NF-YB
NF-YC
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Nucleotide Sequence
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CTTGTAGCGGATACGTACCCGTTCC...

GRMZM2G078691_T01 from maize genome v3

Related TFome: pUT3964

Amino Acid Sequence
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MDPNKSSTPPPPPVMGAPVAYPPPAYPPGVAAGAGAYPPQLYAPPAAAAAQQAAAAQQQQLQIFWAEQYREIEATTDFKN
HNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPR
DDGKDADAAAAAAAAAAGIPRPAAGVPATDPLAYYYVPQQ

Nucleotide Sequence
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ACGTACCCGTTCCATCTCAAGTGAA...

Zm00001d020874_T001 from maize genome v4

Amino Acid Sequence
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MDPNKSSTPPPPPVMGAPVAYPPPAYPPGVAAGAGAYPPQLYAPPAAAAAQQAAAAQQQQLQIFWAEQYREIEATTDFKN
HNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPR
DDGKDADAAAAAAAAAAGIPRPAAGVPATDPLAYYYVPQQ

Nucleotide Sequence
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ATGGATCCTAACAAATCCAGCACCC...

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Protein ZmCA5P16

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmCA5P16 is the regulator

Interactions where ZmCA5P16 is the target
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Zm00001eb316260_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G078691_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d020874_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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